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Big COVIData Study: Predictive factors for the evolution of patients with COVID-19

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Study conducted in English-, French-, German-, and Spanish-speaking countries worldwide

April 2020 to October 2021

  • We aim to define the clinical characteristics and predictive factors of the evolution of patients with COVID-19 to increase the scientific knowledge and help to improve the clinical management of the patients, their treatment and determine the factors that predict their evolution.

  • Taking into account the social and economic impact of the COVID-19 disease in most of the countries, the results obtained will also allow to optimize the management of healthcare resources.

We invite healthcare authorities and institutions to be part of this observational, descriptive study, using data captured from Electronic Health Records (EHRs) across all countries involved.


In this study we propose to take advantage of a software application (i.e. SAVANA), created in the context of the era of electronic health, to be able to reuse the information included in EHRs. This software application is a powerful natural language processing (NLP) free-text analysis engine, capable of meaningfully interpreting the contents of the EHRs, regardless of the management system in which it operates. In this context, this machine learning analytical method can be used to build a flexible, customized and automated predictive model using the information available in EHRs.

Find all COVID-19 updated information and publications on WHO website.

Updated Results

Responsible Parties

 

  • Dr. Ignacio H. Medrano - Chief Medical Officer, Medsavana SL.
  • Jorge Tello - Chief Executive Officer, Medsavana SL.
  • Marisa Serrano, PhD - Chief Research Officer, Medsavana SL.
  • Yolanda González, PhD - Project Manager & Hospitals Lead, Medsavana SL.
  • Alberto Porras, PhD - Medical Lead, Medsavana SL.

 

  • Ignacio Salcedo - Data Scientist, Medsavana SL.
  • Sara Lumbreras, PhD - Data Scientist, Medsavana SL.
  • Carlos del Rio-Bermudez, PhD - RWE Generator Specialist, Medsavana SL.
  • Stephanie Marchesseau, PhD - NLP Lead, Medsavana SL.
  • Andrea Martínez - Sr Biostatistician, Medsavana SL.

Scientific Committee:

  • Dr. José Luis Izquierdo Alonso
    Head of Pneumology Department at Hospital Universitario de Guadalajara (Spain), Universidad de Alcalá (Madrid), Gerencia de Atención Integrada de Guadalajara (SESCAM)


  • Dr. Juan Bautista Soriano
    Associate Professor of Medicine and Senior Scientist at Hospital Universitario La Princesa (Madrid), Respiratory Diseases Networking Biomedical Research Centre (CIBERES), Instituto de Salud Carlos III (ISCIII), Madrid (Spain)
  • Dr. Julio Ancochea
    Full Professor of Medicine at the UAM, Head of the Pneumology section of the Hospital de La Princesa (Madrid, Spain)





The Scientific Committee will be completed with one member from each participating country.

PARTICIPATE IN THE STUDY

Contact with Savana

Defining clinical characteristics and predictive factors of evolution of patients with COVID-19 across Europe
through Big Data, Artificial Intelligence (AI) and Natural Language Processing

laptop icon Big Data in healthcare 

Big Data defines a new method of generating knowledge that is possible due to two complimentary phenomena:

  • Exponential accumulation of data, thanks to network collaboration (internet)
  • Growing computing capacity to process it.

Big Data implies data reuse across different large volume databases with exploration purposes, other than those for which they were originally structured and populated.

Big Data is an extension of Statistics, as it virtually manages “the entire” set of events related to the studied fact, so that it interrelates a large enough number of variables, in order to infer correlations where the human mind is not able to do so.

Medical information is estimated to double every 5 years.

«Probably, no human activity generates as much data as healthcare»

chip iconAI in healthcare 

AI describes the technology that allows computers to perform operations originally attributed uniquely to humans, such as pattern recognition, language, prediction…

The process by which machines are able to learn after having seen numerous examples of the same element is known as «machine learning».

This computational task has become exponentially more efficient thanks to the imitation of human neural networks, in what is called «deep learning».

The main applications of artificial intelligence in healthcare are:

  • Medical natural language processing, which allows to exploit free or unstructured text from electronic health records.
  • Identification of diagnostic or therapeutic patterns, which resemble the common practice of physicians but derived from insights gained from the collective data sets.
  • Predictive analysis, which enables the anticipation of clinical events from patient clusters thereby stratifying their risk.

document iconElectronic Medical Records (EMR) Reuse 

The data recorded by clinicians during their usual practice generates a huge amount of valuable information. This is the representation of what happens with the attended casuistry in the real world, under the uncertain conditions of the environment.

A fundamental requirement in order to accelerate and expand the extraction process is the implementation of electronic health records systems, which not only allow information sharing (interoperability among levels of care) but also the reuse of it.

We can divide the reuse of the EMR into images, numbers and text:

  • Images: more easily exploitable by an artificial intelligence and already existing cases today that overcome the predictive and diagnostic capacity of humans (the case of Google Deepmind diagnosing diabetic retinopathy, melanoma, breast cancer, pneumonia on chest x-ray…)
  • Numbers: also, existing success cases today (prediction in ICU, prediction of hospital mortality, readmissions, stays…)
  • Text

doctor icon Medical Natural Language Processing 

It is just not possible for the clinician to structure or codify every concept recorded in health records.

The granularity of information cannot be achieved unless free text interpretation techniques are used, which can capture all the richness of them. These techniques are grouped under one of the branches of artificial intelligence, called «Natural Language Processing».

It implies the combination of several techniques, in order to detect concepts and relationships among them. Relying on linguistic tools, statistics, databases and medical knowledge, this technology is able to disambiguate the particularities of human language: spelling mistakes, different ways of expressing negatives or speculations, use of acronyms, subjectivity, anaphora, subordinates … to determine which univocal concepts correspond to each clinical annotation.

What makes this procedure more precise and scalable is the application of machine learning based on neural networks, as it allows the “training” of the algorithms to read texts even when they have not been previously seen.


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